Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| BLCA | rs12202849 | chr6:26704972 | A/G | ZNF322B | chr9:99957633-99961910:- | 0.46 | 6.87 | 2.57E-11 | Box Plot |
| BLCA | rs12203080 | chr6:26761381 | T/A | ZNF322B | chr9:99957633-99961910:- | -0.44 | -6.57 | 1.68E-10 | Box Plot |
| BLCA | rs12213056 | chr6:26755838 | C/T | ZNF322B | chr9:99957633-99961910:- | -0.44 | -6.57 | 1.68E-10 | Box Plot |
| BLCA | rs12214674 | chr6:170821226 | C/T | CT47A9 | chrX:120077415-120080737:- | 0.19 | 6.55 | 1.83E-10 | Box Plot |
| BLCA | rs12230284 | chr12:44245217 | C/G | KRTAP13-1 | chr21:31768392-31769140:+ | -0.19 | -6.47 | 3.06E-10 | Box Plot |
| BLCA | rs12236998 | chr9:110473793 | A/C | RAB14 | chr9:123940415-123985292:- | -0.72 | -6.57 | 1.6E-10 | Box Plot |
| BLCA | rs12246411 | chr10:52496546 | C/G | DTNBP1 | chr6:15523032-15663289:- | -0.8 | -7.15 | 4.42E-12 | Box Plot |
| BLCA | rs12246411 | chr10:52496546 | C/G | NOL7 | chr6:13615559-13632971:+ | -0.73 | -6.38 | 5.14E-10 | Box Plot |
| BLCA | rs12256635 | chr10:117446632 | C/T | FAM178A | chr10:102672497-102724893:+ | -0.7 | -6.07 | 3.05E-9 | Box Plot |
| BLCA | rs12256635 | chr10:117446632 | C/T | SMNDC1 | chr10:112050488-112064709:- | -0.68 | -5.97 | 5.27E-9 | Box Plot |
| BLCA | rs12256635 | chr10:117446632 | C/T | VTI1A | chr10:114206756-114578503:+ | -0.84 | -6.29 | 8.84E-10 | Box Plot |
| BLCA | rs12260118 | chr10:116716464 | A/T | USMG5 | chr10:105148798-105156223:- | 0.44 | 6.12 | 2.26E-9 | Box Plot |
| BLCA | rs12261716 | chr10:108448645 | C/T | CWF19L1 | chr10:101992055-102027437:- | 0.71 | 6.51 | 2.39E-10 | Box Plot |
| BLCA | rs12270246 | chr11:117955150 | C/T | BUD13 | chr11:116618886-116643704:- | -0.84 | -6.42 | 3.94E-10 | Box Plot |
| BLCA | rs12270246 | chr11:117955150 | C/T | C11orf57 | chr11:111944810-111955874:+ | -0.85 | -6.37 | 5.34E-10 | Box Plot |